PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_01157-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 177aa    MW: 18942.5 Da    PI: 9.683
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_01157-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.79e-082082455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC..............TTS-STCHHHHHHHHHHHHHHH CS
              HLH  4 ahnerErrRRdriNsafeeLrellPkas...........kapskKlsKaeiLekAveYIksLq 55
                       + +E++RR +++    +L +l+P++s           + ++   +  + L  A  YIk+L+
  TRIUR3_01157-P1 20 ERKDVEKNRRLHMKGLCLKLSSLVPPSSahysstsssppSSNKDAATQLDQLDSAAAYIKQLR 82
                     56899*********************888********96666666****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.8451681IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-101892IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-81894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-42081IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MKGRRQSMVP DGGCSASKME RKDVEKNRRL HMKGLCLKLS SLVPPSSAHY SSTSSSPPSS  60
NKDAATQLDQ LDSAAAYIKQ LRPRIDHLKR RKQAALTGGC SSSVSAGDYK GAPSTSTALP  120
VIEVRCQDGS ALDVALASEA GRPFRLHEVI AVLEQEGAEV VSASFSVVGD KIFYTYK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703062e-95HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003564810.14e-64PREDICTED: uncharacterized protein LOC100832319
TrEMBLM7YTB61e-127M7YTB6_TRIUA; Uncharacterized protein
STRINGMLOC_43080.28e-84(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-15bHLH family protein